Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs75598737 chr17:80721126 A/C 6.44E-9 283 26.07 28.35 16.4 KM Plot
KIRP rs75731479 chr7:20701571 G/T 6.74E-6 288 25.93 23.1 11.2 KM Plot
KIRP rs75766304 chr19:16522811 C/T 2.11E-15 285 26 21.43 8.08 KM Plot
KIRP rs75782365 chr6:26408551 T/G 1.35E-8 288 25.57 29.43 9.77 KM Plot
KIRP rs75853454 chr10:74975172 G/A 1.12E-14 287 26.37 22.02 5.6 KM Plot
KIRP rs75861674 chr17:30304317 A/G 9.37E-12 286 26.6 23.85 10.37 KM Plot
KIRP rs75864804 chr19:8479158 G/A 3.58E-5 277 25.37 32.93 11.43 KM Plot
KIRP rs75989736 chr10:43186516 G/A 6.87E-5 289 25.57 27.47 11.43 KM Plot
KIRP rs76036424 chr10:43517832 A/G 4.3E-5 289 25.67 25.95 11.43 KM Plot
KIRP rs76049956 chr15:61549345 G/C 1.49E-7 283 26.37 24.73 7.47 KM Plot
KIRP rs76081677 chr21:44303720 G/A 0.000151 289 25.58 40.7 13.07 KM Plot
KIRP rs7613370 chr3:16018076 A/G 7.4E-5 284 21.63 26 25.65 KM Plot
KIRP rs76157869 chr7:20693807 T/G 7.27E-6 288 26.07 22.57 11.2 KM Plot
KIRP rs76174631 chr10:43508409 G/T 2.84E-6 285 25.63 26.52 16.12 KM Plot
KIRP rs7617715 chr3:42950181 C/T 1.89E-5 288 26.37 22.57 21.17 KM Plot